Publications

  • The underlying structures of self-attention: symmetry, directionality, and emergent dynamics in Transformer training

    The underlying structures of self-attention: symmetry, directionality, and emergent dynamics in Transformer training
  • Directed and acyclic synaptic connectivity in the human layer 2-3 cortical microcircuit

    2024, Science
    Yangfan Peng, Antje Bjelde, Pau Vilimelis Aceituno, Franz X. Mittermaier, Henrike Planert, Sabine Grosser, Julia Onken, Katharina Faust, Thilo Kalbhenn, Matthias Simon, Helena Radbruch, Pawel Fidzinski, Dietmar Schmitz, Henrik Alle, Martin Holtkamp, Imre Vida, Benjamin F. Grewe, Jörg R. P. Geiger
    Directed and acyclic synaptic connectivity in the human layer 2-3 cortical microcircuit
  • Population-level coding of avoidance learning in medial prefrontal cortex

    2024, nature neuroscience
    Benjamin Ehret, Roman Boehringer, Elisabeth Amadei, Maria Cervera de la Rosa, Christian Henning, Aniruddh R. Galgali, Valerio Mante, Benjamin F. Grewe
    Population-level coding of avoidance learning in medial prefrontal cortex
  • MC Layer Normalization for calibrated uncertainty in Deep Learning

    2024, TMLR
    Thomas Frick, Diego Antognini, Ioana Giurgiu, Benjamin F. Grewe, Cristiano Malossi, Rong J.B. Zhu, Mattia Rigotti
    MC Layer Normalization for calibrated uncertainty in Deep Learning
  • Comprehensive Survey of Deep Transfer Learning for Anomaly Detection in Industrial Time Series: Methods, Applications, and Directions

    2024, IEEE Access
    Peng Yan, Ahmed Abdulkadir, Paul-Philipp Luley, Matthias Rosenthal, Gerrit A. Schatte, Benjamin F. Grewe, Thilo Stadelmann
    Comprehensive Survey of Deep Transfer Learning for Anomaly Detection in Industrial Time Series: Methods, Applications, and Directions
  • Theoretical principles explain the structure of the insect head direction circuit

    2024, eLife
    Pau Vilimelis Aceituno, Dominic Dall'Osta, Ioannis Pisokas
    Theoretical principles explain the structure of the insect head direction circuit
  • Striatum-projecting prefrontal cortex neurons support working memory maintenance

    2023, Nature Communications
    Maria Wilhelm, Yaroslav Sych, Aleksejs Fomins, José Luis Alatorre Warren, Christopher Lewis, Laia Serratosa Capdevila, Roman Boehringer, Elisabeth Amadei, Benjamin F. Grewe, Eoin C. O’Connor, Bnjamin J. Hall, Fritjof Helmchen
    Striatum-projecting prefrontal cortex neurons support working memory maintenance
  • Bio-inspired, task-free continual learning through activity regularization.

    2023, Biological Cybernetics
    Bio-inspired, task-free continual learning through activity regularization.
  • Meta-Learning via Classifier (-free) Guidance.

    2023, TMLR
    Elvis Nava, Seijin Kobayashi, Yifei Yin, Robert K. Katzschmann, Benjamin F. Grewe
    Meta-Learning via Classifier (-free) Guidance.
  • AI to the Rescue of Voltage Imaging.

    2023, Cell Reports Methodes
    Jerome Lecoq, Kaspar Podgorsky, Benjamin F. Grewe
    AI to the Rescue of Voltage Imaging.
  • Learning Cortical Hierarchies with mporal Hebbian Updates.

    Learning Cortical Hierarchies with mporal Hebbian Updates.
  • Deep Brain Imaging in the Move

    2023, Nat. Methods, News&Views
    Deep Brain Imaging in the Move
  • Minimizing Control for Credit Assignment with Strong Feedback

    2022, ICLM
    Minimizing Control for Credit Assignment with Strong Feedback
  • Different encoding of reward location in dorsal and intermediate hippocampus

    2022, Current Biology
    Przemyslaw Jarzebowski, Audrey Hay, Benjamin F. Grewe, Ole Paulsen
    Different encoding of reward location in dorsal and intermediate hippocampus
  • Neural networks with late-phase weights

    2022, ICLR
    Johannes von Oswald, Seijin Kobayashi, Alexander Meulemans, Christian Henning, Benjamin F. Grewe, João Sacramento
    Neural networks with late-phase weights
  • Fast Aquatic Swimmer Optimization with Differentiable Projective Dynamics and Neural Network Hydrodynamic Models

    2021, NeurRips
    Elvis Nava, John Z. Zhang, Mike Y. Michelis, Tao Du, Pingchuan Ma, Benjamin F. Grewe, Wojciech Matusik, Robert K. Katzschmann
    Fast Aquatic Swimmer Optimization with Differentiable Projective Dynamics and Neural Network Hydrodynamic Models
  • Credit Assignment in Neural Networks through Deep Feedback Control

    2021, NeurRips
    Alexander Meulemans, Matilde Tristany Farinha, Javier García Ordóñez, Pau Vilimelis Aceituno, João Sacramento, Benjamin F. Grewe
    Credit Assignment in Neural Networks through Deep Feedback Control
  • Posterior Meta-Replay for Continual Learning

    2021, NeurRips
    Christian Henning, Maria Cervera de la Rosa, Francesco D’Angelo, Johannes von Oswald, Regina Traber, Benjamin Ehret, Seijin Kobayashi, Benjamin F. Grewe, João Sacramento
    Posterior Meta-Replay for Continual Learning
  • Continual Learning in Recurrent Neural Networks

    2021, ICLR
    Benjamin Ehret, Christian Henning, Maria Cervera de la Rosa, Johannes von Oswald, Alexander Meulemans, Benjamin F. Grewe
    Continual Learning in Recurrent Neural Networks
  • Fast retrograde access to projection neuron circuits underlying vocal learning in songbirds.

    2020, Cell Reports
    Daniel Düring, Falk Dittrich, Mariana D. Rocha, Ryosuke O. Tachibana, Chihiro Mori, Kazou Okanoya, Roman Boehringer, Benjamin Ehret, Benjamin F. Grewe, Melanie Rauch, Jean C. Paterna, Robert Kasper, Manfred Gahr, Richard H.R. Hahnloser
    Fast retrograde access to projection neuron circuits underlying vocal learning in songbirds.
  • Deep learning-based behavioral analysis reaches human accuracy and is capable of outperforming commercial solutions.

    2020, Nature Neuropsych.
    Oliver Sturman, Lukas von Ziegler, Christa Schläppi, Furkan Akyol, Mattia Privitera, Daria Slominski, Christina Grimm, Laetitia Thieren, Valerio Zerbi, Benjamin F. Grewe, Johannes Bohacek
    Deep learning-based behavioral analysis reaches human accuracy and is capable of outperforming commercial solutions.
  • A Theoretical framework for Target Propagation.

    2020, NeurRips
    Alexander Meulemans, Francesco S. Carzaniga, Johan A.K. Suykens, João Sacramento, Benjamin F. Grewe
    A Theoretical framework for Target Propagation.
  • Continual Learning with Hypernetworks.

    2020, ICLR
    Johannes von Oswald, Christian Henning, Benjamin F. Grewe, João Sacramento
    Continual Learning with Hypernetworks.
  • Wide. Deep. Fast. Recent Advances in vivo Multi-Photon Microscopy of Neuronal Activity.

    2019, Journal Neurosc.
    Jérôme Lecoq, Natalia Orlova, Benjamin F. Grewe
    Wide. Deep. Fast. Recent Advances in vivo Multi-Photon Microscopy of Neuronal Activity.
  • Amygdala neuronal ensembles dynamically encode behavioral states.

    2019, Science
    Jan Gründemann, Yael Bitterman, Tingjia Lu, Sabine Krabbe, Benjamin F. Grewe, Mark J Schnitzer, Andreas Lüthi
    Amygdala neuronal ensembles dynamically encode behavioral states.
  • An amygdalar neural ensemble that encodes the unpleasantness of pain

    2019, Science
    Gregory Corder, Biafra Ahanonu, Benjamin F. Grewe, Dong Wang, Mark J Schnitzer, Grégory Scherrer
    An amygdalar neural ensemble that encodes the unpleasantness of pain
  • Diametric neural ensemble dynamics in parkinsonian and dyskinetic states.

    2018, Nature
    Jones G. Parker, Jesse D. Marshall, Biafra Ahanonu, Yu-Wei Wu, Tony Hyun Kim, Benjamin F. Grewe, Yanping Zhang, Jin Zhong Li, Jun B. Ding, Michael D. Ehlers, Mark J. Schnitzer
    Diametric neural ensemble dynamics in parkinsonian and dyskinetic states.
  • Neuronal Representation of Social Information in the Medial Amygdala of Awake Behaving Mice.

    2017, Cell
    Ying Li, Alexander Mathis, Benjamin F. Grewe, Jessica A. Osterhout, Biafra Ahanonu, Mark J. Schnitzer, Venkatesh N. Murthy, Catherine Dulac
    Neuronal Representation of Social Information in the Medial Amygdala of Awake Behaving Mice.
  • Social Behavior shapes hypothalamic neural ensemble representations of conspecific sex.

    2017, Nature
    Ryan Remedios, Ann Kennedy, Mariel Zelikowsky, Benjamin F. Grewe, Mark J. Schnitzer, David J. Anderson
    Social Behavior shapes hypothalamic neural ensemble representations of conspecific sex.
  • Neural dynamics underlying a long-term associative memory.

    2017, Nature
    Benjamin F. Grewe, Jan Gründeman, Jerome Lecoq, Lacey Kitch, Jones G Parker, Jesse D. Marschall, Jin-Zhong Li, Andreas Lüthi, Mark J. Schnitzer
    Neural dynamics underlying a long-term associative memory.
  • Distinct Hippocampal Pathways Mediate Dissociable Roles of Context in Memory Retrieval.

    2016, Cell
    Chun Xu, Sabine Krabbe, Jan Gründemann, Paolo Botta, John Fadok, Fumitaka Osakada, Dieter Saur, Benjamin F. Grewe, Mark J. Schnitzer, Ed Callaway, Andreas Lüthi
    Distinct Hippocampal Pathways Mediate Dissociable Roles of Context in Memory Retrieval.
  • 4A/Nogo-A influences the distribution of Kir4.1 but is not essential for potassium conductance in retinal Müller glia.

    2016, Neurosc. Letters
    Sandrine Joly, Dana A. Dodd, Benjamin F. Grewe, Vincent PernetReticulon
    4A/Nogo-A influences the distribution of Kir4.1 but is not essential for potassium conductance in retinal Müller glia.
  • High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor.

    2015, Science
    Yiyang Gong, Cheng Huang, Jin Zhong Li, Benjamin F. Grewe, Yanping Zhang, Stephan Eismann, Mark J. Schnitzer
    High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor.
  • Cellular Level Brain Imaging in Behaving Mammals: An Engineering Approach.

    2015, Neuron
    Elizabeth J. O. Hamel, Benjamin F. Grewe, Jones G. Parker, Mark J. Schnitzer
    Cellular Level Brain Imaging in Behaving Mammals: An Engineering Approach.
  • Visualizing mammalian brain area interactions by dual-axis two-photon calcium imaging.

    2014, Nat. Neurosc.
    Jerome Lecoq, Joan Savall, Dejan Vučinić, Benjamin F. Grewe, Huyn Kim, Jin-Zhong Li, Lacey Kitch, Mark J. Schnitzer
    Visualizing mammalian brain area interactions by dual-axis two-photon calcium imaging.
  • High-speed two-photon calcium imaging of neuronal population activity using acousto-optic deflectors.

    2014, Cold Spring Harb Protoc
    Benjamin F. Grewe, Fritjof Helmchen
    High-speed two-photon calcium imaging of neuronal population activity using acousto-optic deflectors.
  • Two-photon optogenetic toolbox for fast inhibition, excitation and bistable modulation.

    2012, Nat. Methodes
    Rohit Prakash, Ofer Yizhar, Benjamin F. Grewe, Charu Ramakrishnan, Nancy Wang, Inbal Goshen, Adam M. Packer, Darcy S. Peterka, Raphael Yuste, Mark J. Schnitzer, Karl Deisseroth
    Two-photon optogenetic toolbox for fast inhibition, excitation and bistable modulation.
  • Selective Regulation of NR2B by Protein Phosphatase-1 for the Control of the NMDA Receptor in Neuroprotection

    2011, PLoS One
    Mélissa Farinelli, Fabrice Heitz, Benjamin F. Grewe, Shiva Tyagarajan, Fritjof Helmchen, Isabelle Mansuy
    Selective Regulation of NR2B by Protein Phosphatase-1 for the Control of the NMDA Receptor in Neuroprotection
  • Enhancement of CA3 hippocampal network activity by activation of group II metabotropic glutamate receptors.

    2011, PLoS One
    Jeanne Ster, José María Mateos, Benjamin F. Grewe, Guyllaume Coiret, Fritjof Helmchen, Urs Gerber
    Enhancement of CA3 hippocampal network activity by activation of group II metabotropic glutamate receptors.
  • Fast two-layer two-photon imaging of neuronal cell populations using an electrically tunable lens.

    2011, Biomedical Opt. Express
    Benjamin F. Grewe, Fabian F. Voigt, Marcel van ’t Hoff, Fritjof Helmchen
    Fast two-layer two-photon imaging of neuronal cell populations using an electrically tunable lens.
  • High-speed in vivo calcium imaging reveals spike trains in neuronal networks with near-millisecond precision.

    2010, Nature Methods
    Benjamin F. Grewe, Dominik Langer, Björn Kampa, Fritjof Helmchen
    High-speed in vivo calcium imaging reveals spike trains in neuronal networks with near-millisecond precision.
  • Backpropagation of realistic action potential output along apical and basal dendrites of slender-tufted L5A pyramidal neurons.

    2010, Front in Cell Neurosc
    Benjamin F. Grewe, Audrey Bonan, Andreas Frick
    Backpropagation of realistic action potential output along apical and basal dendrites of slender-tufted L5A pyramidal neurons.
  • Optical probing of neuronal ensemble activity.

    2009, Curr. Opin. Neurobiology
    Benjamin F. Grewe, Fritjof Helmchen
    Optical probing of neuronal ensemble activity.